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Cellects Documentation

Overview

Initializing search

Getting started
User guide
Use cases
Contributing
API Reference
License & Citation

Cellects Documentation

Getting started
Getting started
User guide
User guide
- Setting up a first analysis
  Setting up a first analysis
- Improving the analysis
  Improving the analysis
Use cases
Contributing
API Reference
API Reference
- Overview
- cellects
  cellects
  - core
    
    core
    
    cellects_paths
    
    cellects_threads
    
    motion_analysis
    
    one_image_analysis
    
    program_organizer
    
    script_based_run
  - gui
    
    gui
    
    advanced_parameters
    
    cellects
    
    custom_widgets
    
    first_window
    
    if_several_folders_window
    
    image_analysis_window
    
    required_output
    
    ui_strings
    
    video_analysis_window
  - image_analysis
    
    image_analysis
    
    cell_leaving_detection
    
    image_segmentation
    
    morphological_operations
    
    network_functions
    
    one_image_analysis_threads
    
    oscillations_functions
    
    progressively_add_distant_shapes
    
    shape_descriptors
  - utils
    
    utils
    
    decorators
    
    formulas
    
    load_display_save
    
    utilitarian
License & Citation

Improving and personalizing the analysis

This section covers advanced use of Cellects:

Advanced parameters
Required outputs
Multi-folder analyses

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